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Martynowycz, Michael W.; Gonen, Tamir: Ligand Incorporation into Protein Microcrystals for MicroED by On-Grid Soaking. Structure, 29 (1), pp. 88–95.e2, 2021.
Gonen, Tamir; Nannenga, Brent (Ed.): cryoEM: Methods and Protocols. Springer US, 2021, ISBN: 978-1-0716-0965-1.
Zhu, Lan; Bu, Guanhong; Jing, Liang; Shi, Dan; Lee, Ming-Yue; Gonen, Tamir; Liu, Wei; Nannenga, Brent L.: Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED. Structure, 28 (10), pp. 1149–1159.e4, 2020.
Richards, Logan S.; Millán, Claudia; Miao, Jennifer; Martynowycz, Michael W.; Sawaya, Michael R.; Gonen, Tamir; Borges, Rafael J.; Usón, Isabel; Rodriguez, Jose A.: Fragment-based determination of a proteinase K structure from MicroED data using ARCIMBOLDO_SHREDDER. Acta Crystallogr D Biol Crystallogr., 76 (8), pp. 703-712, 2020.
Hattne, Johan; Martynowycz, Michael W; Penczek, Pawel A; Gonen, Tamir: MicroED with the Falcon III direct electron detector. IUCrJ, 6 (Pt 5), pp. 921–926, 2019.
Jones, Christopher G; Martynowycz, Michael W; Hattne, Johan; Fulton, Tyler J; Stoltz, Brian M; Rodriguez, Jose A; Nelson, Hosea M; Gonen, Tamir: The CryoEM Method MicroED as a Powerful Tool for Small Molecule Structure Determination. ACS Cent Sci, 4 (11), pp. 1587–1592, 2018.
Liu, Yuxi; Gonen, Shane; Gonen, Tamir; Yeates, Todd O: Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system. Proc. Natl. Acad. Sci. U.S.A., 115 (13), pp. 3362–3367, 2018.
Krotee, Pascal; Griner, Sarah L; Sawaya, Michael R; Cascio, Duilio; Rodriguez, Jose A; Shi, Dan; Philipp, Stephan; Murray, Kevin; Saelices, Lorena; Lee, Ji; Seidler, Paul; Glabe, Charles G; Jiang, Lin; Gonen, Tamir; Eisenberg, David S: Common fibrillar spines of amyloid-β and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors. J. Biol. Chem., 293 (8), pp. 2888–2902, 2017.
Gonen, Tamir (Ed.): Challenges in Structural Biology. HHMI Janelia Research Campus, 2017.
Bale, Jacob B; Gonen, Shane; Liu, Yuxi; Sheffler, William; Ellis, Daniel; Thomas, Chantz; Cascio, Duilio; Yeates, Todd O; Gonen, Tamir; King, Neil P; Baker, David: Accurate design of megadalton-scale two-component icosahedral protein complexes. Science, 353 (6297), pp. 389–394, 2016.
Gonen, Tamir: The Collection of High-Resolution Electron Diffraction Data. Electron Crystallography of Soluble and Membrane Proteins, 955 , Chapter 9, pp. 153–169, 2012.
Gonen, Shane; Akiyoshi, Bungo; Iadanza, Matthew G; Shi, Dan; Duggan, Nicole; Biggins, Sue; Gonen, Tamir: The structure of purified kinetochores reveals multiple microtubule-attachment sites. Nat. Struct. Mol. Biol., 19 (9), pp. 925–929, 2012.
Gold, Matthew G; Reichow, Steve L; O'Neill, Susan E; Weisbrod, Chad R; Langeberg, Lorene K; Bruce, James E; Gonen, Tamir; Scott, John D: AKAP2 anchors PKA with aquaporin-0 to support ocular lens transparency. EMBO Mol Med, 4 (1), pp. 15–26, 2011.
Reichow, Steve L; Korotkov, Konstantin V; Gonen, Melissa; Sun, Ji; Delarosa, Jaclyn R; Hol, Wim G J; Gonen, Tamir: The binding of cholera toxin to the periplasmic vestibule of the type II secretion channel. Channels (Austin), 5 (3), pp. 215–218, 2011.
Zheng, Hongjin; Taraska, Justin; Merz, Alexey J; Gonen, Tamir: The prototypical H⁺/Galactose Symporter GalP Assembles into Functional Trimers. J. Mol. Biol., 396 (3), pp. 593–601, 2010.
Zheng, Hongjin; Olia, Adam S; Gonen, Melissa; Andrews, Simeon; Cingolani, Gino; Gonen, Tamir: A Conformational Switch in Bacteriophage P22 Portal Protein Primes Genome Injection. Mol. Cell, 29 (3), pp. 376–383, 2008.
Gonen, Tamir; Cheng, Yifan; Sliz, Piotr; Hiroaki, Yoko; Fujiyoshi, Yoshinori; Harrison, Stephen C; Walz, Thomas: Lipid-protein interactions in double-layered two-dimensional AQP0 crystals. Nature, 438 (7068), pp. 633–638, 2005.
Gonen, Tamir; Cheng, Yifan; Kistler, Joerg; Walz, Thomas: Aquaporin-0 Membrane Junctions Form Upon Proteolytic Cleavage. J. Mol. Biol., 342 (4), pp. 1337–1345, 2004.
Gonen, Tamir; Donaldson, Paul; Kistler, Joerg: Galectin-3 Is Associated with the Plasma Membrane of Lens Fiber Cells. Investigative Ophthalmology and Visual Science, 41 (1), pp. 199–203, 2000.
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Unpublished cover art

Filbin, Megan E; Vollmar, Breanna S; Shi, Dan; Gonen, Tamir; Kieft, Jeffrey S: HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation. Nat. Struct. Mol. Biol., 20 (2), pp. 150–158, 2012.
King, Neil P; Sheffler, William; Sawaya, Michael R; Vollmar, Breanna S; Sumida, John P; André, Ingemar; Gonen, Tamir; Yeates, Todd O; Baker, David: Computational Design of Self-Assembling Protein Nanomaterials with Atomic Level Accuracy. Science, 336 (6085), pp. 1171–1174, 2012.
Wisedchaisri, Goragot; Gonen, Tamir: Fragment-Based Phase Extension for Three-Dimensional Structure Determination of Membrane Proteins by Electron Crystallography. Structure, 19 (7), pp. 976–987, 2011.
Jehle, Stefan; Vollmar, Breanna S; Bardiaux, Benjamin; Dove, Katja K; Rajagopal, Ponni; Gonen, Tamir; Oschkinat, Hartmut; Klevit, Rachel E: N-terminal domain of αB-crystallin provides a conformational switch for multimerization and structural heterogeneity. Proc. Natl. Acad. Sci. U.S.A., 108 (16), pp. 6409–6414, 2011.
Wisedchaisri, Goragot; Dranow, David M; Lie, Thomas J; Bonanno, Jeffrey B; Patskovsky, Yury; Ozyurt, Sinem A; Sauder, Michael J; Almo, Steven C; Wasserman, Stephen R; Burley, Stephen K; Leigh, John A; Gonen, Tamir: Structural Underpinnings of Nitrogen Regulation by the Prototypical Nitrogen-Responsive Transcriptional Factor NrpR. Structure, 18 (11), pp. 1512–1521, 2010.
Reichow, Steve L; Korotkov, Konstantin V; Hol, Wim G J; Gonen, Tamir: Structure of the cholera toxin secretion channel in its closed state. Nat. Struct. Mol. Biol., 17 (10), pp. 1226–1232, 2010.
Steve L Reichow, Tamir Gonen: Noncanonical Binding of Calmodulin to Aquaporin-0: Implications for Channel Regulation. In: Structure, 16 (9), pp. 1389–1398, 2008.